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1

Development and validation of four one-step real-time RT-LAMP assays for specific detection of each dengue virus serotype

Lopez-Jimena, Benjamin, Bekaert, Michaël, Bakheit, Mohammed, Frischmann, Sieghard, Patel, Pranav, Simon-Loriere, Etienne, Lambrechts, Louis, Duong, Veasna, Dussart, Philippe, Harold, Graham, Fall, Che

Journal:

PLoS Neglected Tropical Diseases

Year:

2018

Language:

english

File:

PDF, 5.74 MB

english, 2018

2

FHL1 is a major host factor for chikungunya virus infection

Meertens, Laurent, Hafirassou, Mohamed Lamine, Couderc, Thérèse, Bonnet-Madin, Lucie, Kril, Vasiliya, Kümmerer, Beate M., Labeau, Athena, Brugier, Alexis, Simon-Loriere, Etienne, Burlaud-Gaillard, Jul

Journal:

Year:

2019

Language:

english

File:

PDF, 6.51 MB

english, 2019

3

Human Adaptation of Ebola Virus during the West African Outbreak

Urbanowicz, Richard A., McClure, C. Patrick, Sakuntabhai, Anavaj, Sall, Amadou A., Kobinger, Gary, Müller, Marcel A., Holmes, Edward C., Rey, Félix A., Simon-Loriere, Etienne, Ball, Jonathan K.

Journal:

Year:

2016

Language:

english

File:

PDF, 2.47 MB

english, 2016

4

RNA structures, genomic organization and selection of recombinant HIV

Simon-Loriere, Etienne, Rossolillo, Paola, Negroni, Matteo

Journal:

Year:

2011

Language:

english

File:

PDF, 302 KB

english, 2011

5

Autochthonous Japanese Encephalitis with Yellow Fever Coinfection in Africa

Simon-Loriere, Etienne, Faye, Ousmane, Prot, Matthieu, Casademont, Isabelle, Fall, Gamou, Fernandez-Garcia, Maria D., Diagne, Moussa M., Kipela, Jean-Marie, Fall, Ibrahima S., Holmes, Edward C., Sakun

Journal:

New England Journal of Medicine

Year:

2017

Language:

english

File:

PDF, 148 KB

english, 2017

6

Increased adaptive immune responses and proper feedback regulation protect against clinical dengue

Simon-Lorière, Etienne, Duong, Veasna, Tawfik, Ahmed, Ung, Sivlin, Ly, Sowath, Casadémont, Isabelle, Prot, Matthieu, Courtejoie, Noémie, Bleakley, Kevin, Buchy, Philippe, Tarantola, Arnaud, Dussart, P

Journal:

Science Translational Medicine

Year:

2017

Language:

english

File:

PDF, 1.65 MB

english, 2017

7

Improved Immune Responses Against Zika Virus After Sequential Dengue and Zika Virus Infection in Humans

Delgado, Félix, Torres, Karina, Castellanos, Jaime, Romero-Sánchez, Consuelo, Simon-Lorière, Etienne, Sakuntabhai, Anavaj, Roth, Claude

Journal:

Year:

2018

Language:

english

File:

PDF, 3.11 MB

english, 2018

8

Implications of recombination for HIV diversity

Bertha Cecilia Ramirez, Etienne Simon-Loriere, Roman Galetto, Matteo Negroni

Journal:

Year:

2008

Language:

english

File:

PDF, 604 KB

english, 2008

9

Why do RNA viruses recombine?

Simon-Loriere, Etienne, Holmes, Edward C.

Journal:

Nature Reviews Microbiology

Year:

2011

Language:

english

File:

PDF, 429 KB

english, 2011

10

The Effect of Gene Overlapping on the Rate of RNA Virus Evolution

Simon-Loriere, E., Holmes, E. C., Pagan, I.

Journal:

Molecular Biology and Evolution

Year:

2013

Language:

english

File:

PDF, 649 KB

english, 2013

11

Gene Duplication Is Infrequent in the Recent Evolutionary History of RNA Viruses

Simon-Loriere, E., Holmes, E. C.

Journal:

Molecular Biology and Evolution

Year:

2013

Language:

english

File:

PDF, 222 KB

english, 2013

12

Level of Gene Expression Is a Major Determinant of Protein Evolution in the Viral Order Mononegavirales

Pagan, I., Holmes, E. C., Simon-Loriere, E.

Journal:

Journal of Virology

Year:

2012

Language:

english

File:

PDF, 1.33 MB

english, 2012

13

RNA Structures Facilitate Recombination-Mediated Gene Swapping in HIV-1

Simon-Loriere, E., Martin, D. P., Weeks, K. M., Negroni, M.

Journal:

Journal of Virology

Year:

2010

Language:

english

File:

PDF, 1.25 MB

english, 2010

14

Epidemiological Risk Factors Associated with High Global Frequency of Inapparent Dengue Virus Infections

Grange, Laura, Simon-Loriere, Etienne, Sakuntabhai, Anavaj, Gresh, Lionel, Paul, Richard, Harris, Eva

Journal:

Frontiers in Immunology

Year:

2014

Language:

english

File:

PDF, 3.97 MB

english, 2014

15

Molecular Mechanisms of Recombination Restriction in the Envelope Gene of the Human Immunodeficiency Virus

Simon-Loriere, Etienne, Galetto, Roman, Hamoudi, Meriem, Archer, John, Lefeuvre, Pierre, Martin, Darren P., Robertson, David L., Negroni, Matteo, Holmes, Edward C.

Journal:

Year:

2009

Language:

english

File:

PDF, 717 KB

english, 2009

16

High Anti–Dengue Virus Activity of the OAS Gene Family Is Associated With Increased Severity of Dengue

Simon-Loriere, Etienne, Lin, Ren-Jye, Kalayanarooj, Sita Mint, Chuansumrit, Ampaiwan, Casademont, Isabelle, Lin, Shyr-Yi, Yu, Han-Pang, Lert-itthiporn, Worachart, Chaiyaratana, Wathanee, Tangthawornch

Journal:

The Journal of Infectious Diseases

Year:

2015

Language:

english

File:

PDF, 1.29 MB

english, 2015

17

Distinct lineages of Ebola virus in Guinea during the 2014 West African epidemic

Simon-Loriere, Etienne, Faye, Ousmane, Faye, Oumar, Koivogui, Lamine, Magassouba, Nfaly, Keita, Sakoba, Thiberge, Jean-Michel, Diancourt, Laure, Bouchier, Christiane, Vandenbogaert, Matthias, Caro, Va

Journal:

Year:

2015

Language:

english

File:

PDF, 2.00 MB

english, 2015

18

Identifying the Important HIV-1 Recombination Breakpoints

Archer, John, Pinney, John W., Fan, Jun, Simon-Loriere, Etienne, Arts, Eric J., Negroni, Matteo, Robertson, David L., Bonhoeffer, Sebastian

Journal:

PLoS Computational Biology

Year:

2008

Language:

english

File:

PDF, 211 KB

english, 2008

19

Retrovolution: HIV–Driven Evolution of Cellular Genes and Improvement of Anticancer Drug Activation

Rossolillo, Paola, Winter, Flore, Simon-Loriere, Etienne, Gallois-Montbrun, Sarah, Negroni, Matteo, Horwitz, Marshall S.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.40 MB

english, 2012

20

Sequence determinants of breakpoint location during HIV-1 intersubtype recombination

Baird, H. A., Galetto, R., Gao, Y., Simon-Loriere, E., Abreha, M., Archer, J., Fan, J., Robertson, D. L., Arts, E. J., Negroni, M.

Journal:

Nucleic Acids Research

Year:

2006

Language:

english

File:

PDF, 2.08 MB

english, 2006

21

Structural basis of potent Zika–dengue virus antibody cross-neutralization

Barba-Spaeth, Giovanna, Dejnirattisai, Wanwisa, Rouvinski, Alexander, Vaney, Marie-Christine, Medits, Iris, Sharma, Arvind, Simon-Lorière, Etienne, Sakuntabhai, Anavaj, Cao-Lormeau, Van-Mai, Haouz, Ah

Journal:

Year:

2016

Language:

english

File:

PDF, 15.79 MB

english, 2016

22

Interferon-Induced Spermidine-Spermine Acetyltransferase and Polyamine Depletion Restrict Zika and Chikungunya Viruses

Mounce, Bryan C., Poirier, Enzo Z., Passoni, Gabriella, Simon-Loriere, Etienne, Cesaro, Teresa, Prot, Matthieu, Stapleford, Kenneth A., Moratorio, Gonzalo, Sakuntabhai, Anavaj, Levraud, Jean-Pierre, V

Journal:

Cell Host & Microbe

Year:

2016

Language:

english

File:

PDF, 2.00 MB

english, 2016

23

Inhibition of polyamine biosynthesis is a broad-spectrum strategy against RNA viruses

Mounce, Bryan C., Cesaro, Teresa, Moratorio, Gonzalo, Hooikaas, Peter Jan, Yakovleva, Anna, Werneke, Scott W., Smith, Everett Clinton, Poirier, Enzo Z., Simon-Loriere, Etienne, Prot, Matthieu, Tamiett

Journal:

Journal of Virology

Year:

2016

Language:

english

File:

PDF, 1.90 MB

english, 2016

24

Erratum: Structural basis of potent Zika–dengue virus antibody cross-neutralization

Barba-Spaeth, Giovanna, Dejnirattisai, Wanwisa, Rouvinski, Alexander, Vaney, Marie-Christine, Medits, Iris, Sharma, Arvind, Simon-Lorière, Etienne, Sakuntabhai, Anavaj, Cao-Lormeau, Van-Mai, Haouz, Ah

Journal:

Year:

2016

File:

PDF, 39 KB

2016

25

Genetic diversity of the highly variable V1 region interferes with Human Immunodeficiency Virus type 1 envelope functionality

Meriem Hamoudi,Etienne Simon-Loriere,Romain Gasser,Matteo Negroni

Journal:

Year:

2013

Language:

english

File:

PDF, 1.46 MB

english, 2013

26

Drivers of Dengue Intrahost Evolution

Simon-Lorière, Etienne, Vignuzzi, Marco

Journal:

Cell Host & Microbe

Year:

2017

Language:

english

File:

PDF, 165 KB

english, 2017

27

RIG-I Recognizes the 5′ Region of Dengue and Zika Virus Genomes

Chazal, Maxime, Beauclair, Guillaume, Gracias, Ségolène, Najburg, Valérie, Simon-Lorière, Etienne, Tangy, Frédéric, Komarova, Anastassia V., Jouvenet, Nolwenn

Journal:

Year:

2018

Language:

english

File:

PDF, 2.00 MB

english, 2018

28

Immune Responses to Dengue and Zika Viruses—Guidance for T Cell Vaccine Development

Roth, Claude, Delgado, Félix, Simon-Lorière, Etienne, Sakuntabhai, Anavaj

Journal:

International Journal of Environmental Research and Public Health

Year:

2018

Language:

english

File:

PDF, 582 KB

english, 2018

29

Genetic Characterization of Enterovirus A71 Circulating in Africa

Fernandez-Garcia, Maria Dolores, Volle, Romain, Joffret, Marie-Line, Sadeuh-Mba, Serge Alain, Gouandjika-Vasilache, Ionela, Kebe, Ousmane, Wiley, Michael R., Majumdar, Manasi, Simon-Loriere, Etienne,

Journal:

Emerging Infectious Diseases

Year:

2018

Language:

english

File:

PDF, 1.32 MB

english, 2018

30

Genetic diversity of Collaborative Cross mice controls viral replication, clinical severity and brain pathology induced by Zika virus infection, independently of Oas1b .

Manet, Caroline, Simon-Lorière, Etienne, Jouvion, Grégory, Hardy, David, Prot, Matthieu, Conquet, Laurine, Flamand, Marie, Panthier, Jean-Jacques, Sakuntabhai, Anavaj, Montagutelli, Xavier

Journal:

Journal of Virology

Year:

2019

Language:

english

File:

PDF, 2.45 MB

english, 2019

31

Genetic diversity of Collaborative Cross mice controls viral replication, clinical severity and brain pathology induced by Zika virus infection, independently of Oas1b .

Manet, Caroline, Simon-Lorière, Etienne, Jouvion, Grégory, Hardy, David, Prot, Matthieu, Conquet, Laurine, Flamand, Marie, Panthier, Jean-Jacques, Sakuntabhai, Anavaj, Montagutelli, Xavier

Journal:

Journal of Virology

Year:

2019

File:

PDF, 2.45 MB

2019

32

A genome-wide CRISPR-Cas9 screen identifies the dolichol-phosphate mannose synthase complex as a host dependency factor for dengue virus infection.

Labeau, Athena, Simon-Loriere, Etienne, Hafirassou, Mohamed-Lamine, Bonnet-Madin, Lucie, Tessier, Sarah, Zamborlini, Alessia, Dupré, Thierry, Seta, Nathalie, Schwartz, Olivier, Chaix, Marie-Laure, Del

Journal:

Journal of Virology

Year:

2020

File:

PDF, 8.45 MB

2020

33

Repositionnement de la chlorpromazine dans le traitement du COVID-19Â : Ã©tude reCoVery

Plaze, M., Attali, D., Petit, A.-C., Blatzer, M., Simon-Loriere, E., Vinckier, F., Cachia, A., ChrÃ©tien, F., Gaillard, R.

Journal:

Year:

2020

File:

PDF, 706 KB

2020

34

Identification and molecular characterization of the first complete genome sequence of Human Parechovirus type 15

Fernandez-Garcia, Maria Dolores, Simon-Loriere, Etienne, Kebe, Ousmane, Sakuntabhai, A., Ndiaye, Kader

Journal:

Scientific Reports

Year:

2020

File:

PDF, 1.85 MB

2020

35

Repurposing chlorpromazine to treat COVID-19: The reCoVery study

Plaze, M., Attali, D., Petit, A.-C., Blatzer, M., Simon-Loriere, E., Vinckier, F., Cachia, A., ChrÃ©tien, F., Gaillard, R.

Journal:

Year:

2020

File:

PDF, 521 KB

2020

36

A Single Dose of NILV-Based Vaccine Provides Rapid and Durable Protection against Zika Virus

Ku, Min Wen, Anna, FranÃ§ois, Souque, Philippe, Petres, StÃ©phane, Prot, Matthieu, Simon-Loriere, Etienne, Charneau, Pierre, Bourgine, Maryline

Journal:

Molecular Therapy

Year:

2020

File:

PDF, 1.32 MB

2020

37

Targeting polyamines inhibits coronavirus infection by reducing cellular attachment

Firpo, Mason R, Mastrodomenico, Vincent, Hawkins, Grant, Prot, Matthieu, Levillayer, Laura, Gallagher, Thomas, Simon-Loriere, Etienne, Mounce, Bryan

Journal:

ACS Infectious Diseases

Year:

2020

File:

PDF, 94.58 MB

2020